diff --git a/.github/workflows/autofix.yml b/.github/workflows/autofix.yml
index b0cd652c43..4aa39e8696 100644
--- a/.github/workflows/autofix.yml
+++ b/.github/workflows/autofix.yml
@@ -51,6 +51,15 @@ jobs:
         with:
           files: |
             api/**
+      - name: Check dify-agent inputs
+        if: github.event_name != 'merge_group'
+        id: dify-agent-changes
+        uses: tj-actions/changed-files@9426d40962ed5378910ee2e21d5f8c6fcbf2dd96 # v47.0.6
+        with:
+          files: |
+            dify-agent/**/*.py
+            dify-agent/pyproject.toml
+            dify-agent/uv.lock
       - if: github.event_name != 'merge_group'
         uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
         with:
@@ -76,6 +85,17 @@ jobs:
           # Format code
           uv run ruff format ..
 
+      - if: github.event_name != 'merge_group' && steps.dify-agent-changes.outputs.any_changed == 'true'
+        run: |
+          cd dify-agent
+          uv sync --dev
+          # fmt first to avoid line too long
+          uv run ruff format .
+          # Fix lint errors
+          uv run ruff check --fix .
+          # Format code
+          uv run ruff format .
+
       - name: count migration progress
         if: github.event_name != 'merge_group' && steps.api-changes.outputs.any_changed == 'true'
         run: |